Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | SAMN06297358_3269 | Not Available | Positive | 3810618 - 3811010 | 15533.0 |
| hypothetical protein | SAMN06297358_3270 | Not Available | Positive | 3810997 - 3811227 | 8684.9 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN06297358_3271 | Not Available | Positive | 3811327 - 3812013 | 25008.2 |
| hypothetical protein | SAMN06297358_3272 | Not Available | Negative | 3812062 - 3813474 | 53321.6 |
| hypothetical protein | SAMN06297358_3273 | Not Available | Negative | 3813520 - 3815085 | 59191.7 |
| uncharacterized membrane protein ygdd, tmem256/duf423 family | SAMN06297358_3274 | Not Available | Positive | 3815174 - 3815560 | 14289.0 |
| replication restart dna helicase pria | SAMN06297358_3275 | Not Available | Positive | 3815562 - 3818036 | 93374.3 |
| hypothetical protein | SAMN06297358_3276 | Not Available | Negative | 3818033 - 3818716 | 25373.2 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN06297358_3277 | Not Available | Positive | 3818899 - 3819555 | 24597.8 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN06297358_3278 | Not Available | Negative | 3819626 - 3820873 | 46417.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

