Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding regulatory protein, yebc/pmpr family | SAMN06297358_3229 | Not Available | Positive | 3755014 - 3755742 | 27204.0 |
| predicted transcriptional regulator ydee, contains arac-type dna-binding domain | SAMN06297358_3230 | Not Available | Negative | 3755940 - 3756407 | 17837.9 |
| protein of unknown function | SAMN06297358_3231 | Not Available | Negative | 3756488 - 3756946 | 17575.2 |
| phospholipase/carboxylesterase | SAMN06297358_3232 | Not Available | Negative | 3756986 - 3757762 | 29428.3 |
| beta-glucosidase | SAMN06297358_3233 | Not Available | Negative | 3757947 - 3760235 | 83379.3 |
| hypothetical protein | SAMN06297358_3234 | Not Available | Negative | 3760242 - 3761567 | 50053.3 |
| hypothetical protein | SAMN06297358_3235 | Not Available | Negative | 3761670 - 3763331 | 60972.9 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN06297358_3236 | Not Available | Negative | 3763393 - 3764217 | 29131.3 |
| starch-binding associating with outer membrane | SAMN06297358_3237 | Not Available | Negative | 3764237 - 3765724 | 54768.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_3238 | Not Available | Negative | 3765736 - 3768762 | 108217.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

