Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexosaminidase | SAMN06297358_3209 | Not Available | Negative | 3729181 - 3731145 | 74791.7 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN06297358_3210 | Not Available | Negative | 3731361 - 3732767 | 51352.4 |
| hypothetical protein | SAMN06297358_3211 | Not Available | Negative | 3732824 - 3734014 | 45116.7 |
| aspartate-semialdehyde dehydrogenase | SAMN06297358_3212 | Not Available | Negative | 3734091 - 3735080 | 36231.0 |
| lamin tail domain | SAMN06297358_3213 | Not Available | Positive | 3735131 - 3736939 | 65862.5 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN06297358_3214 | Not Available | Positive | 3736995 - 3737744 | 28578.0 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN06297358_3215 | Not Available | Negative | 3737883 - 3738752 | 32361.6 |
| nucleoside transporter | SAMN06297358_3216 | Not Available | Negative | 3738755 - 3739981 | 45486.3 |
| protein of unknown function | SAMN06297358_3217 | Not Available | Negative | 3740072 - 3740725 | 24463.0 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN06297358_3218 | Not Available | Negative | 3740901 - 3742349 | 54076.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

