Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3199 | Not Available | Negative | 3714234 - 3716639 | 90875.2 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN06297358_3200 | Not Available | Positive | 3716778 - 3716963 | 7069.44 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN06297358_3201 | Not Available | Negative | 3717092 - 3718639 | 56100.8 |
| membrane fusion protein, multidrug efflux system | SAMN06297358_3202 | Not Available | Negative | 3718750 - 3719787 | 37358.3 |
| outer membrane protein tolc | SAMN06297358_3203 | Not Available | Negative | 3719795 - 3721102 | 48329.9 |
| transcriptional regulator, tetr family | SAMN06297358_3204 | Not Available | Negative | 3721114 - 3721734 | 23515.7 |
| rep element-mobilizing transposase rayt | SAMN06297358_3205 | Not Available | Negative | 3721845 - 3722399 | 21472.5 |
| peptidase family m28 | SAMN06297358_3206 | Not Available | Negative | 3722496 - 3724202 | 63176.5 |
| asma-like c-terminal region | SAMN06297358_3207 | Not Available | Positive | 3724811 - 3727423 | 94984.6 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN06297358_3208 | Not Available | Negative | 3727603 - 3729147 | 59840.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

