Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase (nad) | SAMN06297358_3189 | Not Available | Negative | 3705281 - 3706360 | 38847.5 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | SAMN06297358_3190 | Not Available | Negative | 3706453 - 3708039 | 60238.8 |
| ssu ribosomal protein s12p methylthiotransferase | SAMN06297358_3191 | Not Available | Negative | 3708229 - 3709560 | 50476.2 |
| mrna-degrading endonuclease rele, toxin component of the relbe toxin-antitoxin system | SAMN06297358_3192 | Not Available | Negative | 3709579 - 3709845 | 10711.9 |
| hypothetical protein | SAMN06297358_3193 | Not Available | Negative | 3709845 - 3710054 | 7881.49 |
| fused signal recognition particle receptor | SAMN06297358_3194 | Not Available | Negative | 3710068 - 3711030 | 34847.0 |
| protein of unknown function | SAMN06297358_3195 | Not Available | Negative | 3711098 - 3711262 | 5811.07 |
| large subunit ribosomal protein l33 | SAMN06297358_3196 | Not Available | Negative | 3711345 - 3711527 | 6984.71 |
| large subunit ribosomal protein l28 | SAMN06297358_3197 | Not Available | Negative | 3711566 - 3711799 | 8890.95 |
| acetyl-coenzyme a synthetase | SAMN06297358_3198 | Not Available | Positive | 3712309 - 3714201 | 70202.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

