Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen synthase | SAMN06297358_3179 | Not Available | Positive | 3696564 - 3697532 | 35723.1 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN06297358_3180 | Not Available | Positive | 3697632 - 3698930 | 46659.9 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN06297358_3181 | Not Available | Positive | 3699309 - 3700175 | 32387.5 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN06297358_3182 | Not Available | Positive | 3700178 - 3700882 | 27311.2 |
| hypothetical protein | SAMN06297358_3183 | Not Available | Positive | 3700882 - 3701403 | 19817.0 |
| uroporphyrinogen decarboxylase | SAMN06297358_3184 | Not Available | Positive | 3701409 - 3702434 | 38104.2 |
| hypothetical protein | SAMN06297358_3185 | Not Available | Positive | 3702510 - 3702743 | 8876.04 |
| predicted abc-type atpase | SAMN06297358_3186 | Not Available | Positive | 3702743 - 3703492 | 28808.3 |
| putative membrane protein | SAMN06297358_3187 | Not Available | Positive | 3703492 - 3704040 | 21044.6 |
| hypothetical protein | SAMN06297358_3188 | Not Available | Positive | 3704146 - 3705279 | 43816.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

