Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein c (pspc) family protein | SAMN06297358_3169 | Not Available | Positive | 3686694 - 3687362 | 25246.1 |
| hypothetical protein | SAMN06297358_3170 | Not Available | Positive | 3687410 - 3688381 | 36181.2 |
| uncharacterized membrane protein yckc, rdd family | SAMN06297358_3171 | Not Available | Positive | 3688530 - 3689129 | 22557.9 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN06297358_3172 | Not Available | Positive | 3689220 - 3691196 | 73005.5 |
| secondary thiamine-phosphate synthase enzyme | SAMN06297358_3173 | Not Available | Negative | 3691271 - 3691693 | 15708.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06297358_3174 | Not Available | Negative | 3691698 - 3692585 | 32807.2 |
| glutamyl-trna reductase | SAMN06297358_3175 | Not Available | Positive | 3692737 - 3693963 | 46693.5 |
| hydroxymethylbilane synthase | SAMN06297358_3176 | Not Available | Positive | 3694088 - 3695668 | 58529.2 |
| hypothetical protein | SAMN06297358_3177 | Not Available | Positive | 3695690 - 3696301 | 23111.9 |
| hypothetical protein | SAMN06297358_3178 | Not Available | Positive | 3696406 - 3696525 | 4365.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

