Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-terminal domain of tricorn protease-containing protein | SAMN06297358_0301 | Not Available | Negative | 340144 - 343383 | 121117.0 |
| transcriptional regulator, tetr family | SAMN06297358_0302 | Not Available | Negative | 343628 - 344305 | 25532.9 |
| hypothetical protein | SAMN06297358_0303 | Not Available | Positive | 344467 - 344625 | 5915.26 |
| hypothetical protein | SAMN06297358_0304 | Not Available | Positive | 344774 - 345292 | 19603.6 |
| ankyrin repeat | SAMN06297358_0305 | Not Available | Positive | 345295 - 346878 | 59759.2 |
| hypothetical protein | SAMN06297358_0306 | Not Available | Positive | 346910 - 347881 | 34605.8 |
| hypothetical protein | SAMN06297358_0307 | Not Available | Positive | 348106 - 348591 | 18561.2 |
| hypothetical protein | SAMN06297358_0308 | Not Available | Positive | 348623 - 349615 | 37135.8 |
| immunity protein 17 | SAMN06297358_0309 | Not Available | Positive | 349656 - 349940 | 10690.4 |
| hypothetical protein | SAMN06297358_0310 | Not Available | Positive | 350152 - 350637 | 17968.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

