Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsz | SAMN06297358_3148 | Not Available | Positive | 3663676 - 3665346 | 60257.7 |
| hypothetical protein | SAMN06297358_3149 | Not Available | Negative | 3665343 - 3665486 | 5717.05 |
| glycine c-acetyltransferase | SAMN06297358_3150 | Not Available | Positive | 3665508 - 3666752 | 46242.0 |
| hypothetical protein | SAMN06297358_3151 | Not Available | Positive | 3666968 - 3667144 | 6427.79 |
| hypothetical protein | SAMN06297358_3152 | Not Available | Negative | 3667198 - 3667482 | 11279.7 |
| hypothetical protein | SAMN06297358_3153 | Not Available | Negative | 3667524 - 3667802 | 10643.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN06297358_3154 | Not Available | Negative | 3668048 - 3668926 | 31563.9 |
| dna ligase (nad+) | SAMN06297358_3155 | Not Available | Negative | 3668998 - 3670980 | 74379.8 |
| topoisomerase-4 subunit a | SAMN06297358_3156 | Not Available | Positive | 3671328 - 3674267 | 109767.0 |
| hypothetical protein | SAMN06297358_3157 | Not Available | Negative | 3674315 - 3675712 | 53239.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

