Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3137 | Not Available | Positive | 3649957 - 3650376 | 16065.8 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN06297358_3138 | Not Available | Positive | 3650376 - 3652478 | 77427.7 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN06297358_3139 | Not Available | Positive | 3652582 - 3654039 | 53133.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN06297358_3140 | Not Available | Positive | 3654039 - 3655301 | 47189.9 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN06297358_3141 | Not Available | Positive | 3655373 - 3656767 | 51212.9 |
| cell division protein ftsw | SAMN06297358_3142 | Not Available | Positive | 3656870 - 3658048 | 42955.2 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN06297358_3144 | Not Available | Positive | 3658507 - 3659610 | 39263.5 |
| udp-n-acetylmuramate--l-alanine ligase | SAMN06297358_3145 | Not Available | Positive | 3659688 - 3661040 | 49725.6 |
| cell division protein ftsq | SAMN06297358_3146 | Not Available | Positive | 3661033 - 3662148 | 41549.2 |
| cell division protein ftsa | SAMN06297358_3147 | Not Available | Positive | 3662179 - 3663534 | 49497.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

