Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular exopolysaccharide family | SAMN06297358_3127 | Not Available | Negative | 3639101 - 3641512 | 90284.0 |
| polysaccharide export outer membrane protein | SAMN06297358_3128 | Not Available | Negative | 3641512 - 3642306 | 29406.7 |
| glycosyl transferase family 2 | SAMN06297358_3129 | Not Available | Positive | 3642600 - 3643343 | 27978.9 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN06297358_3130 | Not Available | Positive | 3643486 - 3644613 | 41201.7 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN06297358_3131 | Not Available | Positive | 3644709 - 3645704 | 35732.7 |
| predicted n-acyltransferase, gnat family | SAMN06297358_3132 | Not Available | Positive | 3645809 - 3646243 | 16222.6 |
| phosphoglycerate kinase | SAMN06297358_3133 | Not Available | Positive | 3646255 - 3647445 | 42849.5 |
| hypothetical protein | SAMN06297358_3134 | Not Available | Positive | 3647467 - 3648024 | 21128.2 |
| mraz protein | SAMN06297358_3135 | Not Available | Positive | 3648551 - 3649021 | 17536.4 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN06297358_3136 | Not Available | Positive | 3649011 - 3649964 | 35495.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

