Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 11 | SAMN06297358_3117 | Not Available | Negative | 3629315 - 3630148 | 32476.3 |
| protein of unknown function, duf268 | SAMN06297358_3118 | Not Available | Negative | 3630145 - 3630918 | 29802.8 |
| abc-type polysaccharide/polyol phosphate transport system, atpase component | SAMN06297358_3119 | Not Available | Negative | 3630920 - 3632209 | 48207.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3120 | Not Available | Negative | 3632225 - 3633007 | 29686.2 |
| hypothetical protein | SAMN06297358_3121 | Not Available | Negative | 3632995 - 3633783 | 31134.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3122 | Not Available | Negative | 3633786 - 3634631 | 32176.2 |
| lipopolysaccharide transport system permease protein | SAMN06297358_3123 | Not Available | Negative | 3634631 - 3635488 | 32515.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3124 | Not Available | Negative | 3635551 - 3636693 | 43247.3 |
| asparagine synthase (glutamine-hydrolysing) | SAMN06297358_3125 | Not Available | Negative | 3636653 - 3638449 | 68696.9 |
| transcription antitermination factor nusg | SAMN06297358_3126 | Not Available | Negative | 3638591 - 3639097 | 19645.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

