Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3107 | Not Available | Negative | 3620478 - 3621098 | 23759.0 |
| hypothetical protein | SAMN06297358_3108 | Not Available | Negative | 3621091 - 3621999 | 34534.3 |
| lipopolysaccharide transport system atp-binding protein | SAMN06297358_3109 | Not Available | Negative | 3622001 - 3623242 | 46147.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3110 | Not Available | Negative | 3623370 - 3624548 | 45767.3 |
| perosamine synthetase | SAMN06297358_3111 | Not Available | Negative | 3624541 - 3625656 | 41562.2 |
| methyltransferase domain-containing protein | SAMN06297358_3112 | Not Available | Negative | 3625656 - 3626408 | 28845.3 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN06297358_3113 | Not Available | Negative | 3626420 - 3626827 | 15567.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3114 | Not Available | Negative | 3626871 - 3627890 | 39540.4 |
| hypothetical protein | SAMN06297358_3115 | Not Available | Negative | 3627892 - 3628110 | 8216.19 |
| gnt-i family protein | SAMN06297358_3116 | Not Available | Negative | 3628366 - 3629310 | 36167.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

