Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3097 | Not Available | Negative | 3609519 - 3610829 | 50280.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3098 | Not Available | Negative | 3610932 - 3612149 | 46510.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3099 | Not Available | Negative | 3612146 - 3613165 | 38667.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3100 | Not Available | Negative | 3613162 - 3614382 | 46455.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3101 | Not Available | Negative | 3614385 - 3615347 | 37537.1 |
| methyltransferase, fkbm family | SAMN06297358_3102 | Not Available | Negative | 3615361 - 3616053 | 26054.3 |
| hypothetical protein | SAMN06297358_3103 | Not Available | Negative | 3616060 - 3616923 | 33040.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3104 | Not Available | Negative | 3617075 - 3618091 | 39379.1 |
| glycosyltransferase family 10 (fucosyltransferase) c-term | SAMN06297358_3105 | Not Available | Negative | 3618082 - 3619044 | 37846.3 |
| protoporphyrinogen oxidase | SAMN06297358_3106 | Not Available | Negative | 3619194 - 3620465 | 49009.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

