Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exosortase/archaeosortase family protein | SAMN06297358_3087 | Not Available | Negative | 3597305 - 3597877 | 22385.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3088 | Not Available | Negative | 3597861 - 3598730 | 34360.5 |
| methyltransferase domain-containing protein | SAMN06297358_3089 | Not Available | Negative | 3598730 - 3599347 | 23132.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3090 | Not Available | Negative | 3599355 - 3600518 | 43783.2 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN06297358_3091 | Not Available | Negative | 3600628 - 3602583 | 71243.8 |
| oligoendopeptidase f | SAMN06297358_3092 | Not Available | Negative | 3602862 - 3604571 | 66072.4 |
| hypothetical protein | SAMN06297358_3093 | Not Available | Negative | 3604642 - 3606033 | 52569.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3094 | Not Available | Negative | 3606033 - 3606995 | 37569.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3095 | Not Available | Negative | 3606985 - 3608196 | 46217.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3096 | Not Available | Negative | 3608267 - 3609544 | 48395.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

