Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | SAMN06297358_3077 | Not Available | Negative | 3587531 - 3588421 | 33492.2 |
| hypothetical protein | SAMN06297358_3078 | Not Available | Negative | 3588990 - 3589307 | 12253.9 |
| atp synthase f1 subcomplex epsilon subunit | SAMN06297358_3079 | Not Available | Negative | 3589560 - 3589805 | 8641.58 |
| atp synthase f1 subcomplex beta subunit | SAMN06297358_3080 | Not Available | Negative | 3589891 - 3591393 | 54138.9 |
| dtdp-4-dehydrorhamnose reductase | SAMN06297358_3081 | Not Available | Positive | 3591646 - 3592560 | 34111.1 |
| peroxiredoxin | SAMN06297358_3082 | Not Available | Positive | 3592640 - 3593101 | 16696.9 |
| Trna-arg | Not Available | Not Available | Positive | 3593455 - 3593531 | Not Available |
| adenylate kinase | SAMN06297358_3084 | Not Available | Positive | 3593593 - 3594162 | 21144.3 |
| gtp-binding protein | SAMN06297358_3085 | Not Available | Positive | 3594413 - 3595408 | 35969.3 |
| carbamoyltransferase | SAMN06297358_3086 | Not Available | Negative | 3595505 - 3597229 | 64886.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

