Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | SAMN06297358_3057 | Not Available | Positive | 3564410 - 3566296 | 69048.1 |
| doxx-like family protein | SAMN06297358_3058 | Not Available | Negative | 3566427 - 3566798 | 13380.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_3059 | Not Available | Positive | 3567233 - 3567796 | 21339.9 |
| hypothetical protein | SAMN06297358_3060 | Not Available | Positive | 3567777 - 3568541 | 28093.4 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06297358_3061 | Not Available | Positive | 3568622 - 3569437 | 30794.9 |
| abc-type fe3+/spermidine/putrescine transport systems, atpase components | SAMN06297358_3062 | Not Available | Positive | 3569704 - 3570696 | 36996.9 |
| hypothetical protein | SAMN06297358_3063 | Not Available | Negative | 3570702 - 3571118 | 15714.5 |
| l-threonine ammonia-lyase | SAMN06297358_3064 | Not Available | Negative | 3571513 - 3572763 | 45926.6 |
| 2-isopropylmalate synthase | SAMN06297358_3065 | Not Available | Negative | 3573040 - 3574212 | 42658.9 |
| 3-isopropylmalate dehydrogenase | SAMN06297358_3066 | Not Available | Negative | 3574308 - 3575381 | 39199.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

