Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_0291 | Not Available | Positive | 328337 - 329560 | 46370.7 |
| phosphoribosylformylglycinamidine synthase | SAMN06297358_0292 | Not Available | Negative | 329645 - 333310 | 133549.0 |
| tetratricopeptide repeat-containing protein | SAMN06297358_0293 | Not Available | Negative | 333389 - 334021 | 24165.4 |
| glyoxylase i family protein | SAMN06297358_0294 | Not Available | Positive | 334394 - 334777 | 14815.7 |
| trna1val (adenine37-n6)-methyltransferase | SAMN06297358_0295 | Not Available | Positive | 334774 - 335478 | 26498.9 |
| cubico group peptidase, beta-lactamase class c family | SAMN06297358_0296 | Not Available | Positive | 335525 - 337330 | 67235.4 |
| hypothetical protein | SAMN06297358_0297 | Not Available | Positive | 337342 - 337833 | 18702.4 |
| fructose-1,6-bisphosphatase i | SAMN06297358_0298 | Not Available | Positive | 337856 - 338908 | 38200.9 |
| protein of unknown function | SAMN06297358_0299 | Not Available | Positive | 338992 - 339510 | 18963.7 |
| ribonuclease hi | SAMN06297358_0300 | Not Available | Negative | 339569 - 340045 | 17877.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

