Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domain | SAMN06297358_0018 | Not Available | Negative | 21546 - 22547 | 37107.2 |
| hypothetical protein | SAMN06297358_0019 | Not Available | Negative | 22549 - 23901 | 51519.6 |
| methyltransferase domain-containing protein | SAMN06297358_0020 | Not Available | Negative | 24184 - 24843 | 24724.5 |
| hypothetical protein | SAMN06297358_0021 | Not Available | Negative | 24830 - 25042 | 7861.99 |
| alcohol dehydrogenase, propanol-preferring | SAMN06297358_0022 | Not Available | Negative | 25223 - 26257 | 36640.6 |
| hypothetical protein | SAMN06297358_0023 | Not Available | Negative | 26437 - 26832 | 15006.0 |
| aldehyde dehydrogenase | SAMN06297358_0024 | Not Available | Negative | 26939 - 28444 | 55031.2 |
| transcriptional regulator, arac family | SAMN06297358_0025 | Not Available | Positive | 28616 - 29539 | 35367.9 |
| hypothetical protein | SAMN06297358_0026 | Not Available | Negative | 29694 - 30305 | 23315.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_0027 | Not Available | Negative | 30307 - 30783 | 18351.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

