Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine-rich cwc | SAMN06297358_3047 | Not Available | Positive | 3555494 - 3555715 | 8338.11 |
| peptide/nickel transport system substrate-binding protein | SAMN06297358_3048 | Not Available | Negative | 3555716 - 3557347 | 62267.8 |
| hypothetical protein | SAMN06297358_3049 | Not Available | Positive | 3557502 - 3557954 | 17061.6 |
| protein of unknown function | SAMN06297358_3050 | Not Available | Positive | 3558015 - 3559082 | 40826.2 |
| nad(p)h-dependent fmn reductase | SAMN06297358_3051 | Not Available | Negative | 3559154 - 3559675 | 19545.6 |
| chromosome partitioning protein | SAMN06297358_3052 | Not Available | Positive | 3559829 - 3560656 | 30594.0 |
| chromosome partitioning protein, parb family | SAMN06297358_3053 | Not Available | Positive | 3560666 - 3561562 | 33352.2 |
| hypothetical protein | SAMN06297358_3054 | Not Available | Positive | 3561562 - 3562230 | 24563.0 |
| dihydrodipicolinate reductase | SAMN06297358_3055 | Not Available | Positive | 3562292 - 3563035 | 27437.6 |
| signal peptidase i | SAMN06297358_3056 | Not Available | Positive | 3563037 - 3564230 | 45831.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

