Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN06297358_3027 | Not Available | Positive | 3530613 - 3531794 | 44591.9 |
| l,d-transpeptidase catalytic domain | SAMN06297358_3028 | Not Available | Negative | 3531791 - 3532357 | 21174.1 |
| methyltransferase, fkbm family | SAMN06297358_3029 | Not Available | Negative | 3532378 - 3533226 | 32832.8 |
| molecular chaperone dnak | SAMN06297358_3030 | Not Available | Positive | 3533616 - 3535523 | 68501.0 |
| nucleotidyl transferase | SAMN06297358_3031 | Not Available | Negative | 3536085 - 3536984 | 33834.0 |
| hypothetical protein | SAMN06297358_3032 | Not Available | Negative | 3537033 - 3538610 | 57193.2 |
| fad/fmn-containing dehydrogenase | SAMN06297358_3033 | Not Available | Positive | 3538966 - 3541908 | 108770.0 |
| ferritin | SAMN06297358_3034 | Not Available | Negative | 3542274 - 3542804 | 20892.4 |
| hypothetical protein | SAMN06297358_3035 | Not Available | Negative | 3542985 - 3543356 | 14237.4 |
| hypothetical protein | SAMN06297358_3036 | Not Available | Positive | 3544230 - 3544628 | 14957.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

