Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_2986 | Not Available | Positive | 3497216 - 3499453 | 77579.1 |
| fecr family protein | SAMN06297358_2987 | Not Available | Positive | 3499485 - 3500666 | 44306.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_2988 | Not Available | Positive | 3500777 - 3504229 | 127644.0 |
| susd family protein | SAMN06297358_2989 | Not Available | Positive | 3504242 - 3505804 | 58759.6 |
| hypothetical protein | SAMN06297358_2990 | Not Available | Positive | 3506036 - 3506989 | 34788.4 |
| hypothetical protein | SAMN06297358_2991 | Not Available | Negative | 3507014 - 3507688 | 25595.6 |
| prephenate dehydrogenase (nadp+) | SAMN06297358_2992 | Not Available | Positive | 3507846 - 3509102 | 46854.9 |
| ribonucleoside-diphosphate reductase class ii | SAMN06297358_2993 | Not Available | Positive | 3509393 - 3511945 | 96046.8 |
| hypothetical protein | SAMN06297358_2994 | Not Available | Positive | 3512183 - 3513019 | 28730.5 |
| uncharacterized membrane protein | SAMN06297358_2995 | Not Available | Positive | 3513019 - 3513408 | 14179.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

