Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_2975 | Not Available | Positive | 3486374 - 3486835 | 16552.2 |
| hth-type transcriptional regulator / antitoxin higa | SAMN06297358_2977 | Not Available | Positive | 3487061 - 3487390 | 12517.4 |
| ssu ribosomal protein s12p | SAMN06297358_2978 | Not Available | Positive | 3487843 - 3488256 | 15037.5 |
| small subunit ribosomal protein s7 | SAMN06297358_2979 | Not Available | Positive | 3488273 - 3488740 | 17551.5 |
| elongation factor g | SAMN06297358_2980 | Not Available | Positive | 3488836 - 3490950 | 77757.1 |
| ssu ribosomal protein s10p | SAMN06297358_2981 | Not Available | Positive | 3491096 - 3491401 | 11418.2 |
| hypothetical protein | SAMN06297358_2982 | Not Available | Negative | 3491486 - 3492376 | 33376.9 |
| gliding motility-associated c-terminal domain-containing protein | SAMN06297358_2983 | Not Available | Positive | 3492644 - 3495322 | 93464.2 |
| type ix secretion system membrane protein, porp/sprf family | SAMN06297358_2984 | Not Available | Positive | 3495371 - 3496249 | 32365.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_2985 | Not Available | Positive | 3496470 - 3497063 | 22840.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

