Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN06297358_0281 | Not Available | Negative | 308399 - 309241 | 32009.2 |
| dihydrolipoamide dehydrogenase | SAMN06297358_0282 | Not Available | Negative | 309373 - 310761 | 48913.3 |
| tonb-dependent receptor plug domain | SAMN06297358_0283 | Not Available | Positive | 311102 - 314365 | 118564.0 |
| carboxymethylenebutenolidase | SAMN06297358_0284 | Not Available | Positive | 314464 - 315318 | 31065.2 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN06297358_0285 | Not Available | Negative | 315437 - 316621 | 43105.2 |
| glutamine synthetase | SAMN06297358_0286 | Not Available | Negative | 317236 - 319419 | 81605.8 |
| protein tonb | SAMN06297358_0287 | Not Available | Positive | 319626 - 320498 | 31164.3 |
| hypothetical protein | SAMN06297358_0288 | Not Available | Positive | 320602 - 321543 | 36571.8 |
| asparagine synthase (glutamine-hydrolysing) | SAMN06297358_0289 | Not Available | Negative | 321546 - 323375 | 69779.9 |
| peptidase family c25 | SAMN06297358_0290 | Not Available | Negative | 323375 - 328318 | 184400.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

