Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN06297358_2935 | Not Available | Positive | 3450162 - 3450992 | 31386.3 |
| glycerophosphoryl diester phosphodiesterase | SAMN06297358_2936 | Not Available | Positive | 3450999 - 3451913 | 34456.7 |
| mfs transporter, opa family, sugar phosphate sensor protein uhpc | SAMN06297358_2937 | Not Available | Positive | 3451932 - 3453254 | 48312.3 |
| outer membrane receptor proteins, mostly fe transport | SAMN06297358_2938 | Not Available | Positive | 3453387 - 3456197 | 104941.0 |
| hypothetical protein | SAMN06297358_2939 | Not Available | Positive | 3456614 - 3457321 | 26836.9 |
| uncharacterized conserved protein | SAMN06297358_2940 | Not Available | Positive | 3457358 - 3457600 | 9621.48 |
| hypothetical protein | SAMN06297358_2941 | Not Available | Positive | 3457604 - 3458335 | 27794.4 |
| lipid a 3-o-deacylase (pagl) | SAMN06297358_2942 | Not Available | Positive | 3458374 - 3459495 | 41302.5 |
| hypothetical protein | SAMN06297358_2943 | Not Available | Positive | 3459500 - 3459682 | 6847.21 |
| hypothetical protein | SAMN06297358_2944 | Not Available | Negative | 3459705 - 3460427 | 27296.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

