Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_2925 | Not Available | Positive | 3434510 - 3436486 | 74650.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_2926 | Not Available | Positive | 3436907 - 3437488 | 23083.9 |
| fecr family protein | SAMN06297358_2927 | Not Available | Positive | 3437543 - 3438505 | 36989.9 |
| hypothetical protein | SAMN06297358_2928 | Not Available | Negative | 3438456 - 3438590 | 5105.43 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_2929 | Not Available | Positive | 3438733 - 3442212 | 127986.0 |
| starch-binding associating with outer membrane | SAMN06297358_2930 | Not Available | Positive | 3442228 - 3443697 | 55143.7 |
| hypothetical protein | SAMN06297358_2931 | Not Available | Positive | 3443728 - 3445662 | 69495.2 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_2932 | Not Available | Positive | 3445695 - 3446966 | 45648.7 |
| hypothetical protein | SAMN06297358_2933 | Not Available | Positive | 3446984 - 3447571 | 21647.7 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_2934 | Not Available | Positive | 3447594 - 3450137 | 91437.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

