Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06297358_2915 | Not Available | Negative | 3421272 - 3424391 | 117501.0 |
| Trna-gln | Not Available | Not Available | Positive | 3424643 - 3424716 | Not Available |
| ribose-phosphate pyrophosphokinase | SAMN06297358_2917 | Not Available | Positive | 3424784 - 3425725 | 34155.3 |
| large subunit ribosomal protein l25 | SAMN06297358_2918 | Not Available | Positive | 3425815 - 3426396 | 21354.1 |
| peptidyl-trna hydrolase, pth1 family | SAMN06297358_2919 | Not Available | Positive | 3426653 - 3427213 | 20448.0 |
| signal transduction histidine kinase | SAMN06297358_2920 | Not Available | Negative | 3427219 - 3428808 | 58911.7 |
| chemotaxis protein methyltransferase cher | SAMN06297358_2921 | Not Available | Negative | 3428822 - 3429643 | 32000.2 |
| signal transduction histidine kinase | SAMN06297358_2922 | Not Available | Negative | 3429663 - 3433157 | 130553.0 |
| transcriptional regulator, spx/mgsr family | SAMN06297358_2923 | Not Available | Positive | 3433305 - 3433655 | 13165.8 |
| hypothetical protein | SAMN06297358_2924 | Not Available | Positive | 3433716 - 3434435 | 26804.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

