Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf1800 family | SAMN06297358_2905 | Not Available | Positive | 3407043 - 3409031 | 74563.7 |
| uncharacterized conserved protein, duf1501 family | SAMN06297358_2906 | Not Available | Positive | 3409038 - 3410309 | 45788.7 |
| hypothetical protein | SAMN06297358_2907 | Not Available | Positive | 3410529 - 3410840 | 11414.8 |
| iron complex outermembrane recepter protein | SAMN06297358_2908 | Not Available | Positive | 3411138 - 3413306 | 81167.0 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN06297358_2909 | Not Available | Positive | 3413438 - 3414694 | 47178.0 |
| nicotinamide phosphoribosyltransferase | SAMN06297358_2910 | Not Available | Negative | 3414702 - 3416153 | 54888.7 |
| ribose-phosphate pyrophosphokinase | SAMN06297358_2911 | Not Available | Negative | 3416166 - 3417002 | 30705.1 |
| 8-oxo-dgtp diphosphatase | SAMN06297358_2912 | Not Available | Negative | 3417075 - 3417767 | 26640.2 |
| carboxypeptidase c (cathepsin a) | SAMN06297358_2913 | Not Available | Positive | 3417913 - 3419502 | 59273.3 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | SAMN06297358_2914 | Not Available | Positive | 3419678 - 3420640 | 35679.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

