Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted neuraminidase (sialidase) | SAMN06297358_2895 | Not Available | Positive | 3393106 - 3394194 | 40915.6 |
| hexosaminidase | SAMN06297358_2896 | Not Available | Positive | 3394222 - 3396498 | 85847.1 |
| beta-glucosidase | SAMN06297358_2897 | Not Available | Positive | 3396503 - 3398836 | 84836.9 |
| mfs transporter, pat family, beta-lactamase induction signal transducer ampg | SAMN06297358_2898 | Not Available | Positive | 3398840 - 3400132 | 47727.8 |
| beta-1,4-mannooligosaccharide/beta-1, 4-mannosyl-n-acetylglucosamine phosphorylase | SAMN06297358_2899 | Not Available | Positive | 3400170 - 3401141 | 36967.7 |
| alpha-1,2-mannosidase, putative | SAMN06297358_2900 | Not Available | Positive | 3401147 - 3403426 | 85047.4 |
| hypothetical protein | SAMN06297358_2901 | Not Available | Positive | 3403605 - 3405023 | 54093.9 |
| hypothetical protein | SAMN06297358_2902 | Not Available | Positive | 3405082 - 3405315 | 9162.28 |
| hypothetical protein | SAMN06297358_2903 | Not Available | Positive | 3405403 - 3406071 | 24899.8 |
| hypothetical protein | SAMN06297358_2904 | Not Available | Positive | 3406081 - 3406809 | 26185.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

