Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN06297358_2874 | Not Available | Positive | 3363256 - 3364659 | 51969.5 |
| beta-glucosidase | SAMN06297358_2875 | Not Available | Positive | 3364922 - 3367237 | 85274.7 |
| glucosylceramidase | SAMN06297358_2876 | Not Available | Positive | 3367250 - 3368671 | 51410.2 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN06297358_2877 | Not Available | Negative | 3368992 - 3369678 | 26035.8 |
| ketopantoate hydroxymethyltransferase | SAMN06297358_2878 | Not Available | Negative | 3370020 - 3370835 | 29570.8 |
| carbamoyl-phosphate synthase small subunit | SAMN06297358_2879 | Not Available | Positive | 3371119 - 3372231 | 40900.8 |
| abc-2 type transport system atp-binding protein | SAMN06297358_2880 | Not Available | Positive | 3372452 - 3373216 | 28106.8 |
| abc-2 type transport system permease protein | SAMN06297358_2881 | Not Available | Positive | 3373259 - 3374350 | 39673.0 |
| nad(p)h-dependent fmn reductase | SAMN06297358_2882 | Not Available | Positive | 3374661 - 3375221 | 20650.1 |
| Trna-pro | Not Available | Not Available | Positive | 3375364 - 3375440 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

