Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_2864 | Not Available | Negative | 3352622 - 3353119 | 19452.6 |
| septum formation initiator | SAMN06297358_2865 | Not Available | Negative | 3353161 - 3353460 | 11948.5 |
| enolase | SAMN06297358_2866 | Not Available | Negative | 3353683 - 3355044 | 49107.5 |
| hypothetical protein | SAMN06297358_2867 | Not Available | Positive | 3355406 - 3355753 | 13592.1 |
| hypothetical protein | SAMN06297358_2868 | Not Available | Positive | 3355796 - 3356359 | 20622.9 |
| hypothetical protein | SAMN06297358_2869 | Not Available | Positive | 3356362 - 3356796 | 15964.0 |
| benzil reductase ((s)-benzoin forming) | SAMN06297358_2870 | Not Available | Positive | 3356797 - 3357534 | 26598.2 |
| hypothetical protein | SAMN06297358_2871 | Not Available | Positive | 3357600 - 3358061 | 17021.4 |
| transposase zinc-ribbon domain-containing protein | SAMN06297358_2872 | Not Available | Positive | 3358128 - 3360062 | 75875.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_2873 | Not Available | Positive | 3360296 - 3363244 | 106978.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

