Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0271 | Not Available | Positive | 298745 - 299215 | 17274.7 |
| hypothetical protein | SAMN06297358_0272 | Not Available | Positive | 299266 - 299871 | 23418.1 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN06297358_0273 | Not Available | Positive | 299913 - 301586 | 61345.4 |
| hypothetical protein | SAMN06297358_0274 | Not Available | Positive | 301731 - 301997 | 9973.97 |
| peptidase family m28 | SAMN06297358_0275 | Not Available | Negative | 302043 - 303017 | 36486.7 |
| voltage-dependent potassium channel beta subunit, animal | SAMN06297358_0276 | Not Available | Positive | 303102 - 304085 | 36561.9 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN06297358_0277 | Not Available | Negative | 304215 - 305723 | 55885.8 |
| rna polymerase primary sigma factor | SAMN06297358_0278 | Not Available | Negative | 305802 - 306662 | 32707.1 |
| hypothetical protein | SAMN06297358_0279 | Not Available | Negative | 307005 - 307598 | 22497.4 |
| calcineurin-like phosphoesterase | SAMN06297358_0280 | Not Available | Negative | 307564 - 308394 | 31209.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

