Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerophosphatase | SAMN06297358_2834 | Not Available | Negative | 3322095 - 3322550 | 16934.3 |
| myo-inositol-1-phosphate synthase | SAMN06297358_2835 | Not Available | Negative | 3322840 - 3324153 | 48877.0 |
| nucleoside-diphosphate-sugar epimerase | SAMN06297358_2836 | Not Available | Negative | 3324275 - 3325267 | 37211.1 |
| hypothetical protein | SAMN06297358_2837 | Not Available | Negative | 3325274 - 3326395 | 42317.6 |
| serine palmitoyltransferase | SAMN06297358_2838 | Not Available | Negative | 3326397 - 3327602 | 44181.2 |
| transcriptional regulator, arac family | SAMN06297358_2839 | Not Available | Positive | 3328198 - 3329094 | 34309.5 |
| uncharacterized osmc-related protein | SAMN06297358_2840 | Not Available | Positive | 3329267 - 3329671 | 14485.3 |
| malate dehydrogenase (quinone) | SAMN06297358_2841 | Not Available | Positive | 3329720 - 3331237 | 55834.1 |
| bacillithiol system protein ytxj | SAMN06297358_2842 | Not Available | Negative | 3331367 - 3331702 | 12732.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN06297358_2843 | Not Available | Negative | 3331869 - 3332360 | 17430.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

