Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_2824 | Not Available | Negative | 3310801 - 3312108 | 49541.3 |
| signal transduction histidine kinase | SAMN06297358_2825 | Not Available | Negative | 3312239 - 3314335 | 78327.6 |
| protein of unknown function | SAMN06297358_2826 | Not Available | Negative | 3314446 - 3315003 | 21356.2 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN06297358_2827 | Not Available | Negative | 3315008 - 3315586 | 22046.6 |
| n-acetylglutamate synthase, gnat family | SAMN06297358_2828 | Not Available | Negative | 3315650 - 3316084 | 16413.0 |
| pap2 superfamily protein | SAMN06297358_2829 | Not Available | Negative | 3316084 - 3317028 | 36309.5 |
| fatty acid hydroxylase superfamily protein | SAMN06297358_2830 | Not Available | Negative | 3317191 - 3317814 | 24668.1 |
| phosphatidylglycerophosphate synthase | SAMN06297358_2831 | Not Available | Negative | 3317819 - 3319099 | 47610.6 |
| carboxypepd_reg-like domain-containing protein | SAMN06297358_2832 | Not Available | Negative | 3319152 - 3321713 | 98644.5 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN06297358_2833 | Not Available | Negative | 3321716 - 3322090 | 14124.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

