Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | SAMN06297358_2803 | Not Available | Negative | 3284465 - 3285061 | 22622.2 |
| isopenicillin n synthase | SAMN06297358_2805 | Not Available | Positive | 3285522 - 3286484 | 36117.9 |
| osta-like protein | SAMN06297358_2806 | Not Available | Negative | 3286543 - 3288798 | 84552.3 |
| trna(ile)-lysidine synthase | SAMN06297358_2807 | Not Available | Positive | 3288909 - 3290237 | 50924.3 |
| hypothetical protein | SAMN06297358_2808 | Not Available | Positive | 3290238 - 3290720 | 18847.0 |
| hypothetical protein | SAMN06297358_2809 | Not Available | Positive | 3290848 - 3291315 | 17216.8 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SAMN06297358_2810 | Not Available | Positive | 3291451 - 3292581 | 42231.7 |
| dnaj domain-containing protein | SAMN06297358_2811 | Not Available | Positive | 3292754 - 3293200 | 17489.6 |
| 6-phosphogluconolactonase | SAMN06297358_2812 | Not Available | Negative | 3293273 - 3294373 | 39823.9 |
| 23s rrna pseudouridine2605 synthase | SAMN06297358_2813 | Not Available | Negative | 3294445 - 3295890 | 55250.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

