Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein c (pspc) family protein | SAMN06297358_2793 | Not Available | Positive | 3271205 - 3272821 | 61505.1 |
| carboxypepd_reg-like domain-containing protein | SAMN06297358_2794 | Not Available | Positive | 3273049 - 3275478 | 90706.3 |
| hypothetical protein | SAMN06297358_2795 | Not Available | Positive | 3275857 - 3277590 | 63024.0 |
| hypothetical protein | SAMN06297358_2796 | Not Available | Positive | 3277757 - 3277918 | 6361.5 |
| Trna-cys | Not Available | Not Available | Positive | 3278142 - 3278215 | Not Available |
| hypothetical protein | SAMN06297358_2798 | Not Available | Negative | 3278278 - 3280992 | 100463.0 |
| nitroreductase | SAMN06297358_2799 | Not Available | Negative | 3281480 - 3282109 | 23312.7 |
| transcriptional regulator, tetr family | SAMN06297358_2800 | Not Available | Negative | 3282117 - 3282713 | 22901.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06297358_2801 | Not Available | Positive | 3282970 - 3283926 | 34770.6 |
| uncharacterized conserved protein ybcv, duf1398 family | SAMN06297358_2802 | Not Available | Negative | 3284007 - 3284396 | 14814.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

