Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| subtilase family protein | SAMN06297358_2783 | Not Available | Positive | 3260799 - 3262340 | 55908.6 |
| acetyl-coa hydrolase/succinyl-coa:acetate coa-transferase | SAMN06297358_2784 | Not Available | Negative | 3262688 - 3264193 | 54414.3 |
| transcriptional regulator, arac family | SAMN06297358_2785 | Not Available | Negative | 3264277 - 3265095 | 31098.0 |
| hypothetical protein | SAMN06297358_2786 | Not Available | Negative | 3265182 - 3265481 | 10904.2 |
| hypothetical protein | SAMN06297358_2787 | Not Available | Negative | 3265576 - 3266289 | 26554.9 |
| hypothetical protein | SAMN06297358_2788 | Not Available | Positive | 3266484 - 3267629 | 41703.0 |
| hypothetical protein | SAMN06297358_2789 | Not Available | Negative | 3267630 - 3267791 | 5811.32 |
| glutamate-5-semialdehyde dehydrogenase | SAMN06297358_2790 | Not Available | Negative | 3268020 - 3269258 | 45178.2 |
| glutamate 5-kinase | SAMN06297358_2791 | Not Available | Negative | 3269355 - 3270431 | 38932.5 |
| padr family transcriptional regulator, regulatory protein padr | SAMN06297358_2792 | Not Available | Positive | 3270816 - 3271166 | 13125.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

