Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | SAMN06297358_2773 | Not Available | Negative | 3247236 - 3248717 | 54140.1 |
| transcriptional regulator, laci family | SAMN06297358_2774 | Not Available | Negative | 3248825 - 3249841 | 37135.6 |
| hypothetical protein | SAMN06297358_2775 | Not Available | Negative | 3249943 - 3251223 | 49689.4 |
| predicted arabinose efflux permease, mfs family | SAMN06297358_2776 | Not Available | Positive | 3251404 - 3252606 | 44512.5 |
| response regulator receiver domain-containing protein | SAMN06297358_2777 | Not Available | Positive | 3252873 - 3253247 | 14201.1 |
| transcriptional regulator, tetr family | SAMN06297358_2778 | Not Available | Positive | 3253424 - 3254023 | 23086.8 |
| membrane fusion protein, multidrug efflux system | SAMN06297358_2779 | Not Available | Positive | 3254101 - 3255297 | 42883.8 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN06297358_2780 | Not Available | Positive | 3255308 - 3258496 | 115004.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06297358_2781 | Not Available | Positive | 3258507 - 3259916 | 51218.9 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN06297358_2782 | Not Available | Positive | 3260153 - 3260731 | 21790.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

