Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN06297358_2763 | Not Available | Negative | 3229133 - 3230545 | 53561.5 |
| gliding motility-associated c-terminal domain-containing protein | SAMN06297358_2764 | Not Available | Positive | 3230936 - 3236170 | 177082.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN06297358_2765 | Not Available | Positive | 3236291 - 3237145 | 31448.3 |
| response regulator receiver domain-containing protein | SAMN06297358_2766 | Not Available | Positive | 3237153 - 3237509 | 12964.7 |
| long-chain acyl-coa synthetase | SAMN06297358_2767 | Not Available | Positive | 3237825 - 3239600 | 66797.7 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN06297358_2768 | Not Available | Positive | 3239569 - 3241347 | 64994.9 |
| ompa-ompf porin, oop family | SAMN06297358_2769 | Not Available | Positive | 3241963 - 3243294 | 47477.9 |
| hypothetical protein | SAMN06297358_2770 | Not Available | Negative | 3243362 - 3243838 | 17611.1 |
| solute:na+ symporter, sss family | SAMN06297358_2771 | Not Available | Negative | 3244001 - 3245689 | 61985.2 |
| xylose isomerase | SAMN06297358_2772 | Not Available | Negative | 3245814 - 3247145 | 50062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

