Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_2753 | Not Available | Negative | 3214146 - 3217880 | 133829.0 |
| hypothetical protein | SAMN06297358_2754 | Not Available | Positive | 3217932 - 3218396 | 16863.6 |
| hypothetical protein | SAMN06297358_2755 | Not Available | Positive | 3218549 - 3218809 | 9104.95 |
| hypothetical protein | SAMN06297358_2756 | Not Available | Negative | 3218813 - 3219676 | 32378.4 |
| outer membrane protein tolc | SAMN06297358_2757 | Not Available | Negative | 3219750 - 3221069 | 49017.4 |
| multidrug efflux pump | SAMN06297358_2758 | Not Available | Negative | 3221081 - 3224197 | 113841.0 |
| membrane fusion protein, multidrug efflux system | SAMN06297358_2759 | Not Available | Negative | 3224200 - 3225279 | 38257.2 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN06297358_2760 | Not Available | Positive | 3225606 - 3227429 | 67194.1 |
| hypothetical protein | SAMN06297358_2761 | Not Available | Negative | 3227503 - 3227973 | 16822.2 |
| two component transcriptional regulator, luxr family | SAMN06297358_2762 | Not Available | Positive | 3228481 - 3229128 | 24455.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

