Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa synthetase beta subunit | SAMN06297358_0261 | Not Available | Negative | 291282 - 292475 | 43017.9 |
| hypothetical protein | SAMN06297358_0262 | Not Available | Negative | 292748 - 293296 | 21108.9 |
| hypothetical protein | SAMN06297358_0263 | Not Available | Negative | 293304 - 294041 | 28942.9 |
| hypothetical protein | SAMN06297358_0264 | Not Available | Negative | 294053 - 294340 | 10767.9 |
| protein of unknown function | SAMN06297358_0265 | Not Available | Negative | 294353 - 296032 | 63880.1 |
| hypothetical protein | SAMN06297358_0266 | Not Available | Negative | 296116 - 296439 | 11910.4 |
| hypothetical protein | SAMN06297358_0267 | Not Available | Negative | 296486 - 296797 | 11465.6 |
| transcriptional regulator | SAMN06297358_0268 | Not Available | Negative | 296862 - 297158 | 11037.5 |
| hypothetical protein | SAMN06297358_0269 | Not Available | Negative | 297225 - 297854 | 23183.8 |
| lipoprotein-releasing system atp-binding protein | SAMN06297358_0270 | Not Available | Positive | 298035 - 298685 | 23818.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

