Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN06297358_2743 | Not Available | Positive | 3192265 - 3193170 | 32744.8 |
| deoxyribodipyrimidine photo-lyase | SAMN06297358_2744 | Not Available | Negative | 3193190 - 3194521 | 51916.9 |
| hypothetical protein | SAMN06297358_2745 | Not Available | Negative | 3194505 - 3195419 | 33594.8 |
| polyhydroxybutyrate depolymerase | SAMN06297358_2746 | Not Available | Negative | 3195481 - 3196383 | 33933.1 |
| lactate dehydrogenase | SAMN06297358_2747 | Not Available | Positive | 3196421 - 3197398 | 36044.6 |
| galactose mutarotase | SAMN06297358_2748 | Not Available | Positive | 3197629 - 3198498 | 33158.0 |
| phospholipase c | SAMN06297358_2749 | Not Available | Positive | 3198656 - 3200974 | 87568.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_2750 | Not Available | Positive | 3201378 - 3204887 | 124911.0 |
| hypothetical protein | SAMN06297358_2751 | Not Available | Positive | 3205096 - 3209037 | 141348.0 |
| hypothetical protein | SAMN06297358_2752 | Not Available | Positive | 3209232 - 3213851 | 161627.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

