Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN06297358_2713 | Not Available | Negative | 3159455 - 3160393 | 33523.7 |
| large subunit ribosomal protein l32 | SAMN06297358_2714 | Not Available | Negative | 3160486 - 3160677 | 7137.54 |
| uncharacterized metal-binding protein yced, duf177 family | SAMN06297358_2715 | Not Available | Negative | 3160697 - 3161227 | 20237.2 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN06297358_2716 | Not Available | Negative | 3161478 - 3162329 | 31171.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN06297358_2717 | Not Available | Negative | 3162341 - 3163420 | 39170.0 |
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | SAMN06297358_2718 | Not Available | Positive | 3163587 - 3164363 | 29755.0 |
| peptidase family s41 | SAMN06297358_2719 | Not Available | Positive | 3164394 - 3165557 | 44149.3 |
| d-3-phosphoglycerate dehydrogenase | SAMN06297358_2720 | Not Available | Positive | 3165562 - 3166491 | 34567.6 |
| organic hydroperoxide reductase osmc/ohra | SAMN06297358_2721 | Not Available | Positive | 3166586 - 3167062 | 17603.0 |
| transcription elongation factor grea | SAMN06297358_2722 | Not Available | Positive | 3167484 - 3167957 | 17007.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

