Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | SAMN06297358_2703 | Not Available | Negative | 3149289 - 3150503 | 46578.6 |
| Trna-glu | Not Available | Not Available | Positive | 3150750 - 3150821 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3150856 - 3150931 | Not Available |
| gtp-binding protein era | SAMN06297358_2706 | Not Available | Positive | 3151265 - 3152155 | 33760.9 |
| gtp-binding protein | SAMN06297358_2707 | Not Available | Positive | 3152374 - 3153675 | 49162.5 |
| acetyltransferase (gnat) family protein | SAMN06297358_2708 | Not Available | Positive | 3154742 - 3155260 | 19930.7 |
| ribosome biogenesis gtpase | SAMN06297358_2709 | Not Available | Negative | 3155320 - 3156240 | 34259.6 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN06297358_2710 | Not Available | Negative | 3156440 - 3157780 | 49525.3 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMN06297358_2711 | Not Available | Negative | 3157826 - 3158299 | 16774.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN06297358_2712 | Not Available | Negative | 3158444 - 3159439 | 35807.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

