Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02646 family protein | SAMN06297358_2692 | Not Available | Negative | 3133095 - 3133985 | 34526.2 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN06297358_2693 | Not Available | Negative | 3133978 - 3135720 | 67232.1 |
| putative atp-dependent endonuclease of the old family | SAMN06297358_2694 | Not Available | Positive | 3135956 - 3137797 | 68839.5 |
| part of aaa domain-containing protein | SAMN06297358_2695 | Not Available | Positive | 3137781 - 3139760 | 74483.3 |
| hypothetical protein | SAMN06297358_2696 | Not Available | Positive | 3139782 - 3140738 | 37103.7 |
| orf6c domain-containing protein | SAMN06297358_2697 | Not Available | Positive | 3140805 - 3141890 | 41571.1 |
| hypothetical protein | SAMN06297358_2698 | Not Available | Positive | 3141921 - 3143120 | 47292.5 |
| hypothetical protein | SAMN06297358_2699 | Not Available | Positive | 3143122 - 3143694 | 22100.5 |
| protein of unknown function | SAMN06297358_2700 | Not Available | Positive | 3143678 - 3147352 | 140945.0 |
| hypothetical protein | SAMN06297358_2701 | Not Available | Positive | 3147342 - 3148202 | 32227.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

