Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer | SAMN06297358_2672 | Not Available | Positive | 3113566 - 3115548 | 75007.1 |
| phage/plasmid-like protein tigr03299 | SAMN06297358_2673 | Not Available | Positive | 3115907 - 3116950 | 38089.0 |
| hypothetical protein | SAMN06297358_2674 | Not Available | Positive | 3117173 - 3117649 | 19109.2 |
| hypothetical protein | SAMN06297358_2675 | Not Available | Positive | 3117663 - 3118091 | 16739.6 |
| hypothetical protein | SAMN06297358_2676 | Not Available | Positive | 3118088 - 3118477 | 15282.4 |
| hypothetical protein | SAMN06297358_2677 | Not Available | Positive | 3118474 - 3118680 | 7621.05 |
| hypothetical protein | SAMN06297358_2678 | Not Available | Positive | 3118667 - 3119026 | 14473.2 |
| prtrc system protein e | SAMN06297358_2679 | Not Available | Positive | 3119013 - 3119618 | 23184.4 |
| prtrc system protein c | SAMN06297358_2680 | Not Available | Positive | 3119630 - 3119848 | 8106.64 |
| hypothetical protein | SAMN06297358_2681 | Not Available | Positive | 3119865 - 3121031 | 45135.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

