Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_2652 | Not Available | Positive | 3077151 - 3080516 | 123229.0 |
| susd family protein | SAMN06297358_2653 | Not Available | Positive | 3080519 - 3081895 | 51222.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN06297358_2654 | Not Available | Positive | 3081940 - 3083196 | 48353.9 |
| hypothetical protein | SAMN06297358_2655 | Not Available | Negative | 3083228 - 3083521 | 10549.2 |
| methylamine utilisation protein maue | SAMN06297358_2656 | Not Available | Negative | 3083582 - 3084022 | 17162.4 |
| lyttr dna-binding domain-containing protein | SAMN06297358_2657 | Not Available | Negative | 3084133 - 3084960 | 31581.2 |
| hypothetical protein | SAMN06297358_2658 | Not Available | Positive | 3085198 - 3085545 | 13681.5 |
| fic/doc family protein | SAMN06297358_2659 | Not Available | Negative | 3085589 - 3087070 | 55810.3 |
| helix-turn-helix | SAMN06297358_2660 | Not Available | Negative | 3087274 - 3087624 | 13340.2 |
| hypothetical protein | SAMN06297358_2661 | Not Available | Positive | 3087850 - 3090099 | 84367.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

