Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase, alpha chain | SAMN06297358_0248 | Not Available | Positive | 275651 - 276421 | 28502.3 |
| hypothetical protein | SAMN06297358_0250 | Not Available | Negative | 277411 - 277938 | 20165.6 |
| protein n-acetyltransferase, rimj/riml family | SAMN06297358_0251 | Not Available | Negative | 277949 - 278494 | 21034.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_0253 | Not Available | Negative | 279833 - 283153 | 118870.0 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN06297358_0254 | Not Available | Negative | 283251 - 283871 | 22872.4 |
| glutamate synthase domain-containing protein 2 | SAMN06297358_0255 | Not Available | Positive | 284028 - 285668 | 60144.9 |
| asparaginyl-trna synthetase | SAMN06297358_0256 | Not Available | Negative | 285793 - 287229 | 55005.6 |
| signal transduction histidine kinase | SAMN06297358_0257 | Not Available | Positive | 287369 - 288715 | 50538.7 |
| signal transduction histidine kinase | SAMN06297358_0258 | Not Available | Negative | 288691 - 289686 | 38014.1 |
| methyltransferase domain-containing protein | SAMN06297358_0259 | Not Available | Negative | 290245 - 290877 | 24020.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

