Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_2632 | Not Available | Negative | 3055609 - 3056292 | 26860.8 |
| hypothetical protein | SAMN06297358_2633 | Not Available | Negative | 3056359 - 3057195 | 32329.6 |
| bacteroides conjugation system atpase, trag family | SAMN06297358_2634 | Not Available | Negative | 3057207 - 3059675 | 94271.0 |
| protein of unknown function | SAMN06297358_2635 | Not Available | Negative | 3059740 - 3060072 | 12209.6 |
| hypothetical protein | SAMN06297358_2636 | Not Available | Negative | 3060084 - 3061511 | 54023.9 |
| adenine-specific dna methylase, n12 class | SAMN06297358_2637 | Not Available | Negative | 3061513 - 3067035 | 210494.0 |
| hypothetical protein | SAMN06297358_2638 | Not Available | Negative | 3067069 - 3067500 | 17008.5 |
| protein of unknown function | SAMN06297358_2639 | Not Available | Negative | 3067519 - 3067842 | 11286.9 |
| hypothetical protein | SAMN06297358_2640 | Not Available | Negative | 3067964 - 3068422 | 17715.0 |
| radc-like jab domain-containing protein | SAMN06297358_2641 | Not Available | Positive | 3068744 - 3069214 | 17587.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

