Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radc-like jab domain-containing protein | SAMN06297358_2609 | Not Available | Negative | 3034319 - 3034777 | 17166.8 |
| transposase | SAMN06297358_2610 | Not Available | Negative | 3034963 - 3036006 | 39918.8 |
| hypothetical protein | SAMN06297358_2611 | Not Available | Negative | 3036473 - 3037426 | 36923.1 |
| helix-turn-helix | SAMN06297358_2615 | Not Available | Positive | 3039134 - 3039565 | 16550.0 |
| n-6 dna methylase | SAMN06297358_2616 | Not Available | Positive | 3040050 - 3043091 | 119177.0 |
| hypothetical protein | SAMN06297358_2617 | Not Available | Positive | 3043072 - 3043788 | 28392.5 |
| hypothetical protein | SAMN06297358_2618 | Not Available | Positive | 3044100 - 3045365 | 45404.6 |
| hypothetical protein | SAMN06297358_2619 | Not Available | Positive | 3045362 - 3046405 | 39679.6 |
| hypothetical protein | SAMN06297358_2620 | Not Available | Negative | 3046424 - 3046657 | 8826.94 |
| hypothetical protein | SAMN06297358_2621 | Not Available | Negative | 3046720 - 3047013 | 11396.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

